STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC41287.1Precorrin-2 dehydrogenase. (230 aa)    
Predicted Functional Partners:
SDC41228.1
Uroporphyrinogen III methyltransferase / synthase.
 
 0.999
SDC41262.1
Hydroxymethylbilane synthase.
 
 0.990
SDC33906.1
Cobalt-precorrin 4 C11-methyltransferase.
  
 0.988
SDC30201.1
Sulfite reductase (ferredoxin).
 
 
 0.952
SDC34025.1
CbiX protein.
  
 
 0.949
SDC41084.1
Glutamate-1-semialdehyde 2,1-aminomutase.
  
 0.913
SDC41180.1
Porphobilinogen synthase.
 
  
 0.903
SDC33863.1
precorrin-3B C17-methyltransferase.
  
 0.897
SDC33925.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
 
  
 0.865
SDC41127.1
DNA-binding transcriptional regulator, Lrp family.
 
  
  0.865
Your Current Organism:
Fuchsiella alkaliacetigena
NCBI taxonomy Id: 957042
Other names: DSM 24880, F. alkaliacetigena, Fuchsiella alkaliacetigena Zhilina et al. 2012, Halobacteroidaceae bacterium Z-7100, VKM B-2667, strain Z-7100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.