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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH2Protein serine kinase H2. (385 aa)    
Predicted Functional Partners:
UNC119B
GMP_PDE_delta domain-containing protein.
   
 0.755
DCX
Doublecortin.
 
  
 
 0.622
PAN3
PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]
      
 0.507
ENSGGOP00000044877
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.490
CALML4
Uncharacterized protein.
   
 0.490
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
   
 0.489
PEAK3
PEAK family member 3.
      
 0.483
CALM3
Calmodulin 1; Belongs to the calmodulin family.
   
 0.482
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
   
 
 0.482
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.436
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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