G3QFN1_GORGO protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3QFN1_GORGO

Katanin catalytic subunit A1; Belongs to the AAA ATPase family. (415 aa)

Predicted Functional Partners:

KATNB1

0.978

KATNBL1

0.885

ENTHD1

0.874

ZNHIT2

0.871

SLITRK1

0.860

KIF18A

0.849

ENSGGOP00000028845

0.827

PRDM10

0.810

G3RPJ8_GORGO

0.720

HERC5

0.711

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000028845	G3QFN1_GORGO	ENSGGOP00000028845	ENSGGOP00000001108	Katanin_con80 domain-containing protein.	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	0.827
ENSGGOP00000028845	KATNB1	ENSGGOP00000028845	ENSGGOP00000006983	Katanin_con80 domain-containing protein.	Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...]	0.810
ENTHD1	G3QFN1_GORGO	ENSGGOP00000000315	ENSGGOP00000001108	ENTH domain containing 1.	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	0.874
ENTHD1	HERC5	ENSGGOP00000000315	ENSGGOP00000010679	ENTH domain containing 1.	HECT and RLD domain containing E3 ubiquitin protein ligase 5.	0.743
ENTHD1	KIF18A	ENSGGOP00000000315	ENSGGOP00000000513	ENTH domain containing 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.842
ENTHD1	PRDM10	ENSGGOP00000000315	ENSGGOP00000014988	ENTH domain containing 1.	PR/SET domain 10.	0.843
ENTHD1	SLITRK1	ENSGGOP00000000315	ENSGGOP00000023394	ENTH domain containing 1.	SLIT and NTRK like family member 1.	0.837
ENTHD1	ZNHIT2	ENSGGOP00000000315	ENSGGOP00000002674	ENTH domain containing 1.	Zinc finger HIT-type containing 2.	0.870
G3QFN1_GORGO	ENSGGOP00000028845	ENSGGOP00000001108	ENSGGOP00000028845	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	Katanin_con80 domain-containing protein.	0.827
G3QFN1_GORGO	ENTHD1	ENSGGOP00000001108	ENSGGOP00000000315	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	ENTH domain containing 1.	0.874
G3QFN1_GORGO	G3RPJ8_GORGO	ENSGGOP00000001108	ENSGGOP00000017718	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	Proteasome 26S subunit, non-ATPase 6.	0.720
G3QFN1_GORGO	HERC5	ENSGGOP00000001108	ENSGGOP00000010679	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	HECT and RLD domain containing E3 ubiquitin protein ligase 5.	0.711
G3QFN1_GORGO	KATNB1	ENSGGOP00000001108	ENSGGOP00000006983	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...]	0.978
G3QFN1_GORGO	KATNBL1	ENSGGOP00000001108	ENSGGOP00000021721	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	Katanin_con80 domain-containing protein.	0.885
G3QFN1_GORGO	KIF18A	ENSGGOP00000001108	ENSGGOP00000000513	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.849
G3QFN1_GORGO	PRDM10	ENSGGOP00000001108	ENSGGOP00000014988	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	PR/SET domain 10.	0.810
G3QFN1_GORGO	SLITRK1	ENSGGOP00000001108	ENSGGOP00000023394	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	SLIT and NTRK like family member 1.	0.860
G3QFN1_GORGO	ZNHIT2	ENSGGOP00000001108	ENSGGOP00000002674	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	Zinc finger HIT-type containing 2.	0.871
G3RPJ8_GORGO	G3QFN1_GORGO	ENSGGOP00000017718	ENSGGOP00000001108	Proteasome 26S subunit, non-ATPase 6.	Katanin catalytic subunit A1; Belongs to the AAA ATPase family.	0.720
HERC5	ENTHD1	ENSGGOP00000010679	ENSGGOP00000000315	HECT and RLD domain containing E3 ubiquitin protein ligase 5.	ENTH domain containing 1.	0.743