SLC38A2 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SLC38A2

Solute carrier family 38 member 2. (506 aa)

Predicted Functional Partners:

SLC38A1

0.902

SLC7A5

0.590

SLC1A5

0.579

SCN11A

0.572

PBX2

0.571

SLC2A12

0.545

AANAT

0.534

LAMTOR2

0.532

G3QVK7_GORGO

0.527

LAMTOR1

0.520

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AANAT	SLC38A1	ENSGGOP00000015091	ENSGGOP00000049722	Aralkylamine N-acetyltransferase.	Solute carrier family 38 member 1.	0.524
AANAT	SLC38A2	ENSGGOP00000015091	ENSGGOP00000001330	Aralkylamine N-acetyltransferase.	Solute carrier family 38 member 2.	0.534
G3QVK7_GORGO	SLC38A1	ENSGGOP00000006781	ENSGGOP00000049722	Uncharacterized protein.	Solute carrier family 38 member 1.	0.527
G3QVK7_GORGO	SLC38A2	ENSGGOP00000006781	ENSGGOP00000001330	Uncharacterized protein.	Solute carrier family 38 member 2.	0.527
LAMTOR1	LAMTOR2	ENSGGOP00000012187	ENSGGOP00000006670	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.999
LAMTOR1	SLC38A1	ENSGGOP00000012187	ENSGGOP00000049722	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Solute carrier family 38 member 1.	0.511
LAMTOR1	SLC38A2	ENSGGOP00000012187	ENSGGOP00000001330	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Solute carrier family 38 member 2.	0.520
LAMTOR2	LAMTOR1	ENSGGOP00000006670	ENSGGOP00000012187	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.999
LAMTOR2	SLC38A1	ENSGGOP00000006670	ENSGGOP00000049722	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	Solute carrier family 38 member 1.	0.533
LAMTOR2	SLC38A2	ENSGGOP00000006670	ENSGGOP00000001330	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	Solute carrier family 38 member 2.	0.532
PBX2	SLC38A1	ENSGGOP00000002289	ENSGGOP00000049722	PBX homeobox 2.	Solute carrier family 38 member 1.	0.531
PBX2	SLC38A2	ENSGGOP00000002289	ENSGGOP00000001330	PBX homeobox 2.	Solute carrier family 38 member 2.	0.571
SCN11A	SLC38A1	ENSGGOP00000006428	ENSGGOP00000049722	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.	Solute carrier family 38 member 1.	0.572
SCN11A	SLC38A2	ENSGGOP00000006428	ENSGGOP00000001330	Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.	Solute carrier family 38 member 2.	0.572
SLC1A5	SLC38A1	ENSGGOP00000008596	ENSGGOP00000049722	Amino acid transporter.	Solute carrier family 38 member 1.	0.545
SLC1A5	SLC38A2	ENSGGOP00000008596	ENSGGOP00000001330	Amino acid transporter.	Solute carrier family 38 member 2.	0.579
SLC1A5	SLC7A5	ENSGGOP00000008596	ENSGGOP00000028230	Amino acid transporter.	Solute carrier family 7 member 5.	0.717
SLC2A12	SLC38A2	ENSGGOP00000012863	ENSGGOP00000001330	Solute carrier family 2 member 12; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	Solute carrier family 38 member 2.	0.545
SLC38A1	AANAT	ENSGGOP00000049722	ENSGGOP00000015091	Solute carrier family 38 member 1.	Aralkylamine N-acetyltransferase.	0.524
SLC38A1	G3QVK7_GORGO	ENSGGOP00000049722	ENSGGOP00000006781	Solute carrier family 38 member 1.	Uncharacterized protein.	0.527