Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
UBE2D3Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)    
Predicted Functional Partners:
UBA1
Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.973
G3QLU7_GORGO
RING-type domain-containing protein.
   
 0.972
OTUB1
OTU domain-containing protein.
   
 0.964
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.963
ENSGGOP00000032650
STIP1 homology and U-box containing protein 1.
   
 0.961
WWP2
E3 ubiquitin-protein ligase.
    
 0.953
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
   
 0.950
BARD1
BRCA1 associated RING domain 1.
   
 0.950
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 0.950
RNF7
Ring finger protein 7.
   
 0.947
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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