STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPC1Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (533 aa)    
Predicted Functional Partners:
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.984
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.967
SDC4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.962
HBEGF
Heparin binding EGF like growth factor.
    
 0.947
SDC2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.914
SLIT2
Slit guidance ligand 2.
    
 0.795
SLIT3
Slit guidance ligand 3.
    
 0.778
G3R7U1_GORGO
Collagen type XVIII alpha 1 chain.
    
 
 0.774
NOTUM
Notum, palmitoleoyl-protein carboxylesterase.
    
 0.725
G3R6J5_GORGO
Solute carrier family 3 member 2.
      
 0.700
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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