PRDM1 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMX	PRDM1	ENSGGOP00000015541	ENSGGOP00000001899	Tyrosine-protein kinase.	PR/SET domain 1.	0.802
EHMT2	HDAC1	ENSGGOP00000049968	ENSGGOP00000011454	Euchromatic histone lysine methyltransferase 2.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.937
EHMT2	HDAC2	ENSGGOP00000049968	ENSGGOP00000005320	Euchromatic histone lysine methyltransferase 2.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.888
EHMT2	PRDM1	ENSGGOP00000049968	ENSGGOP00000001899	Euchromatic histone lysine methyltransferase 2.	PR/SET domain 1.	0.779
FBXO11	PRDM1	ENSGGOP00000011325	ENSGGOP00000001899	F-box protein 11.	PR/SET domain 1.	0.712
G3RTC0_GORGO	PRDM1	ENSGGOP00000019045	ENSGGOP00000001899	Sox C-terminal domain-containing protein.	PR/SET domain 1.	0.743
G3RTC0_GORGO	SOX17	ENSGGOP00000019045	ENSGGOP00000023161	Sox C-terminal domain-containing protein.	HMG box domain-containing protein.	0.882
G3RTC0_GORGO	TFAP2C	ENSGGOP00000019045	ENSGGOP00000000413	Sox C-terminal domain-containing protein.	Transcription factor AP-2 gamma.	0.767
HDAC1	EHMT2	ENSGGOP00000011454	ENSGGOP00000049968	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	Euchromatic histone lysine methyltransferase 2.	0.937
HDAC1	HDAC2	ENSGGOP00000011454	ENSGGOP00000005320	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.999
HDAC1	PRDM1	ENSGGOP00000011454	ENSGGOP00000001899	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	PR/SET domain 1.	0.701
HDAC2	EHMT2	ENSGGOP00000005320	ENSGGOP00000049968	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	Euchromatic histone lysine methyltransferase 2.	0.888
HDAC2	HDAC1	ENSGGOP00000005320	ENSGGOP00000011454	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.999
HDAC2	PRDM1	ENSGGOP00000005320	ENSGGOP00000001899	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	PR/SET domain 1.	0.849
IRF4	PAX5	ENSGGOP00000047970	ENSGGOP00000003571	Interferon regulatory factor 4.	Paired box 5.	0.641
IRF4	PRDM1	ENSGGOP00000047970	ENSGGOP00000001899	Interferon regulatory factor 4.	PR/SET domain 1.	0.747
PAX5	IRF4	ENSGGOP00000003571	ENSGGOP00000047970	Paired box 5.	Interferon regulatory factor 4.	0.641
PAX5	PRDM1	ENSGGOP00000003571	ENSGGOP00000001899	Paired box 5.	PR/SET domain 1.	0.733
PRDM1	BMX	ENSGGOP00000001899	ENSGGOP00000015541	PR/SET domain 1.	Tyrosine-protein kinase.	0.802
PRDM1	EHMT2	ENSGGOP00000001899	ENSGGOP00000049968	PR/SET domain 1.	Euchromatic histone lysine methyltransferase 2.	0.779