ABCG2 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ABCG2

ABC transporter domain-containing protein. (655 aa)

Predicted Functional Partners:

ABCC2

0.969

ENSGGOP00000030029

0.851

ABCG5

0.754

ABCC3

0.741

EPHX1

0.707

ENSGGOP00000039877

0.687

G3S3B7_GORGO

0.661

SLCO6A1

0.612

SLC17A4

0.607

BMI1

0.604

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCC2	ABCG2	ENSGGOP00000018083	ENSGGOP00000001971	ATP binding cassette subfamily C member 2.	ABC transporter domain-containing protein.	0.969
ABCC2	ABCG5	ENSGGOP00000018083	ENSGGOP00000000611	ATP binding cassette subfamily C member 2.	ATP binding cassette subfamily G member 5.	0.514
ABCC2	SLCO6A1	ENSGGOP00000018083	ENSGGOP00000014359	ATP binding cassette subfamily C member 2.	Solute carrier organic anion transporter family member.	0.688
ABCC3	ABCG2	ENSGGOP00000003354	ENSGGOP00000001971	ATP binding cassette subfamily C member 3.	ABC transporter domain-containing protein.	0.741
ABCC3	SLCO6A1	ENSGGOP00000003354	ENSGGOP00000014359	ATP binding cassette subfamily C member 3.	Solute carrier organic anion transporter family member.	0.699
ABCG2	ABCC2	ENSGGOP00000001971	ENSGGOP00000018083	ABC transporter domain-containing protein.	ATP binding cassette subfamily C member 2.	0.969
ABCG2	ABCC3	ENSGGOP00000001971	ENSGGOP00000003354	ABC transporter domain-containing protein.	ATP binding cassette subfamily C member 3.	0.741
ABCG2	ABCG5	ENSGGOP00000001971	ENSGGOP00000000611	ABC transporter domain-containing protein.	ATP binding cassette subfamily G member 5.	0.754
ABCG2	BMI1	ENSGGOP00000001971	ENSGGOP00000027591	ABC transporter domain-containing protein.	RING-type domain-containing protein.	0.604
ABCG2	ENSGGOP00000030029	ENSGGOP00000001971	ENSGGOP00000030029	ABC transporter domain-containing protein.	ATP binding cassette subfamily C member 1.	0.851
ABCG2	ENSGGOP00000039877	ENSGGOP00000001971	ENSGGOP00000039877	ABC transporter domain-containing protein.	Uncharacterized protein.	0.687
ABCG2	EPHX1	ENSGGOP00000001971	ENSGGOP00000000845	ABC transporter domain-containing protein.	Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.	0.707
ABCG2	G3S3B7_GORGO	ENSGGOP00000001971	ENSGGOP00000022567	ABC transporter domain-containing protein.	ATP binding cassette subfamily C member 6.	0.661
ABCG2	SLC17A4	ENSGGOP00000001971	ENSGGOP00000002170	ABC transporter domain-containing protein.	Solute carrier family 17 member 4.	0.607
ABCG2	SLCO6A1	ENSGGOP00000001971	ENSGGOP00000014359	ABC transporter domain-containing protein.	Solute carrier organic anion transporter family member.	0.612
ABCG5	ABCC2	ENSGGOP00000000611	ENSGGOP00000018083	ATP binding cassette subfamily G member 5.	ATP binding cassette subfamily C member 2.	0.514
ABCG5	ABCG2	ENSGGOP00000000611	ENSGGOP00000001971	ATP binding cassette subfamily G member 5.	ABC transporter domain-containing protein.	0.754
ABCG5	G3S3B7_GORGO	ENSGGOP00000000611	ENSGGOP00000022567	ATP binding cassette subfamily G member 5.	ATP binding cassette subfamily C member 6.	0.491
BMI1	ABCG2	ENSGGOP00000027591	ENSGGOP00000001971	RING-type domain-containing protein.	ABC transporter domain-containing protein.	0.604
ENSGGOP00000030029	ABCG2	ENSGGOP00000030029	ENSGGOP00000001971	ATP binding cassette subfamily C member 1.	ABC transporter domain-containing protein.	0.851