UBQLN3 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

UBQLN3

Ubiquilin 3. (655 aa)

Predicted Functional Partners:

UBQLN2

0.845

ADRM1

0.839

DESI1

0.810

PSMD14

0.800

UBE3A

0.784

EPS15

0.779

ENSGGOP00000031928

0.768

PSMD4

0.768

UBA52

0.755

TRIP12

0.750

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRM1	ENSGGOP00000031928	ENSGGOP00000008265	ENSGGOP00000031928	Adhesion regulating molecule 1.	VWFA domain-containing protein.	0.986
ADRM1	PSMD14	ENSGGOP00000008265	ENSGGOP00000015361	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 14.	0.997
ADRM1	PSMD4	ENSGGOP00000008265	ENSGGOP00000039363	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 4.	0.997
ADRM1	UBA52	ENSGGOP00000008265	ENSGGOP00000004534	Adhesion regulating molecule 1.	Ubiquitin-like domain-containing protein.	0.914
ADRM1	UBQLN2	ENSGGOP00000008265	ENSGGOP00000016574	Adhesion regulating molecule 1.	Ubiquilin 2.	0.957
ADRM1	UBQLN3	ENSGGOP00000008265	ENSGGOP00000002016	Adhesion regulating molecule 1.	Ubiquilin 3.	0.839
DESI1	ENSGGOP00000031928	ENSGGOP00000043728	ENSGGOP00000031928	Desumoylating isopeptidase 1.	VWFA domain-containing protein.	0.781
DESI1	PSMD4	ENSGGOP00000043728	ENSGGOP00000039363	Desumoylating isopeptidase 1.	Proteasome 26S subunit, non-ATPase 4.	0.917
DESI1	UBQLN2	ENSGGOP00000043728	ENSGGOP00000016574	Desumoylating isopeptidase 1.	Ubiquilin 2.	0.928
DESI1	UBQLN3	ENSGGOP00000043728	ENSGGOP00000002016	Desumoylating isopeptidase 1.	Ubiquilin 3.	0.810
ENSGGOP00000031928	ADRM1	ENSGGOP00000031928	ENSGGOP00000008265	VWFA domain-containing protein.	Adhesion regulating molecule 1.	0.986
ENSGGOP00000031928	DESI1	ENSGGOP00000031928	ENSGGOP00000043728	VWFA domain-containing protein.	Desumoylating isopeptidase 1.	0.781
ENSGGOP00000031928	PSMD14	ENSGGOP00000031928	ENSGGOP00000015361	VWFA domain-containing protein.	Proteasome 26S subunit, non-ATPase 14.	0.995
ENSGGOP00000031928	PSMD4	ENSGGOP00000031928	ENSGGOP00000039363	VWFA domain-containing protein.	Proteasome 26S subunit, non-ATPase 4.	0.901
ENSGGOP00000031928	TRIP12	ENSGGOP00000031928	ENSGGOP00000045047	VWFA domain-containing protein.	Thyroid hormone receptor interactor 12.	0.449
ENSGGOP00000031928	UBA52	ENSGGOP00000031928	ENSGGOP00000004534	VWFA domain-containing protein.	Ubiquitin-like domain-containing protein.	0.659
ENSGGOP00000031928	UBE3A	ENSGGOP00000031928	ENSGGOP00000039570	VWFA domain-containing protein.	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.	0.820
ENSGGOP00000031928	UBQLN2	ENSGGOP00000031928	ENSGGOP00000016574	VWFA domain-containing protein.	Ubiquilin 2.	0.864
ENSGGOP00000031928	UBQLN3	ENSGGOP00000031928	ENSGGOP00000002016	VWFA domain-containing protein.	Ubiquilin 3.	0.768
EPS15	UBA52	ENSGGOP00000025507	ENSGGOP00000004534	Epidermal growth factor receptor pathway substrate 15.	Ubiquitin-like domain-containing protein.	0.672