Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRCA1 | ENSGGOP00000050590 | ENSGGOP00000023921 | ENSGGOP00000050590 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | Uncharacterized protein. | 0.542 |
BRCA1 | UBA52 | ENSGGOP00000023921 | ENSGGOP00000004534 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | Ubiquitin-like domain-containing protein. | 0.623 |
BRCA1 | UBC | ENSGGOP00000023921 | ENSGGOP00000001286 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | Polyubiquitin-C; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...] | 0.629 |
BRCA1 | UBE2K | ENSGGOP00000023921 | ENSGGOP00000003207 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. | 0.852 |
ENSGGOP00000047423 | ENSGGOP00000050590 | ENSGGOP00000047423 | ENSGGOP00000050590 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Uncharacterized protein. | 0.892 |
ENSGGOP00000047423 | HTT | ENSGGOP00000047423 | ENSGGOP00000016036 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Huntingtin. | 0.418 |
ENSGGOP00000047423 | TRIP12 | ENSGGOP00000047423 | ENSGGOP00000045047 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Thyroid hormone receptor interactor 12. | 0.431 |
ENSGGOP00000047423 | UBA1 | ENSGGOP00000047423 | ENSGGOP00000007393 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family. | 0.849 |
ENSGGOP00000047423 | UBA52 | ENSGGOP00000047423 | ENSGGOP00000004534 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.985 |
ENSGGOP00000047423 | UBA6 | ENSGGOP00000047423 | ENSGGOP00000014395 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin like modifier activating enzyme 6. | 0.849 |
ENSGGOP00000047423 | UBA7 | ENSGGOP00000047423 | ENSGGOP00000028165 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. | 0.849 |
ENSGGOP00000047423 | UBC | ENSGGOP00000047423 | ENSGGOP00000001286 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Polyubiquitin-C; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...] | 0.892 |
ENSGGOP00000047423 | UBE2K | ENSGGOP00000047423 | ENSGGOP00000003207 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. | 0.972 |
ENSGGOP00000050590 | BRCA1 | ENSGGOP00000050590 | ENSGGOP00000023921 | Uncharacterized protein. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.542 |
ENSGGOP00000050590 | ENSGGOP00000047423 | ENSGGOP00000050590 | ENSGGOP00000047423 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.892 |
ENSGGOP00000050590 | TRIP12 | ENSGGOP00000050590 | ENSGGOP00000045047 | Uncharacterized protein. | Thyroid hormone receptor interactor 12. | 0.821 |
ENSGGOP00000050590 | UBA1 | ENSGGOP00000050590 | ENSGGOP00000007393 | Uncharacterized protein. | Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family. | 0.792 |
ENSGGOP00000050590 | UBA52 | ENSGGOP00000050590 | ENSGGOP00000004534 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.915 |
ENSGGOP00000050590 | UBA6 | ENSGGOP00000050590 | ENSGGOP00000014395 | Uncharacterized protein. | Ubiquitin like modifier activating enzyme 6. | 0.792 |
ENSGGOP00000050590 | UBA7 | ENSGGOP00000050590 | ENSGGOP00000028165 | Uncharacterized protein. | Ubiquitin like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. | 0.792 |
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