UBA52 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000019740	ENSGGOP00000050590	ENSGGOP00000019740	ENSGGOP00000050590	annotation not available	Uncharacterized protein.	0.977
ENSGGOP00000019740	FAU	ENSGGOP00000019740	ENSGGOP00000002675	annotation not available	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.980
ENSGGOP00000019740	G3S6C1_GORGO	ENSGGOP00000019740	ENSGGOP00000023628	annotation not available	Ubiquitin-like domain-containing protein.	0.980
ENSGGOP00000019740	G3SEP4_GORGO	ENSGGOP00000019740	ENSGGOP00000026578	annotation not available	Ubiquitin-like domain-containing protein.	0.900
ENSGGOP00000019740	RPL38	ENSGGOP00000019740	ENSGGOP00000033522	annotation not available	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.967
ENSGGOP00000019740	RPL8	ENSGGOP00000019740	ENSGGOP00000041951	annotation not available	Ribosomal protein L8.	0.978
ENSGGOP00000019740	RPS27A	ENSGGOP00000019740	ENSGGOP00000007509	annotation not available	Ubiquitin-like domain-containing protein.	0.900
ENSGGOP00000019740	RPS28	ENSGGOP00000019740	ENSGGOP00000019283	annotation not available	Ribosomal protein S28.	0.978
ENSGGOP00000019740	UBA52	ENSGGOP00000019740	ENSGGOP00000004534	annotation not available	Ubiquitin-like domain-containing protein.	0.996
ENSGGOP00000019740	UBC	ENSGGOP00000019740	ENSGGOP00000001286	annotation not available	Polyubiquitin-C; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...]	0.987
ENSGGOP00000050590	ENSGGOP00000019740	ENSGGOP00000050590	ENSGGOP00000019740	Uncharacterized protein.	annotation not available	0.977
ENSGGOP00000050590	FAU	ENSGGOP00000050590	ENSGGOP00000002675	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.528
ENSGGOP00000050590	G3S6C1_GORGO	ENSGGOP00000050590	ENSGGOP00000023628	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.493
ENSGGOP00000050590	G3SEP4_GORGO	ENSGGOP00000050590	ENSGGOP00000026578	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.977
ENSGGOP00000050590	RPL38	ENSGGOP00000050590	ENSGGOP00000033522	Uncharacterized protein.	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.828
ENSGGOP00000050590	RPL8	ENSGGOP00000050590	ENSGGOP00000041951	Uncharacterized protein.	Ribosomal protein L8.	0.867
ENSGGOP00000050590	RPS27A	ENSGGOP00000050590	ENSGGOP00000007509	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.977
ENSGGOP00000050590	RPS28	ENSGGOP00000050590	ENSGGOP00000019283	Uncharacterized protein.	Ribosomal protein S28.	0.751
ENSGGOP00000050590	UBA52	ENSGGOP00000050590	ENSGGOP00000004534	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.995
ENSGGOP00000050590	UBC	ENSGGOP00000050590	ENSGGOP00000001286	Uncharacterized protein.	Polyubiquitin-C; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...]	0.901