STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QPX5_GORGOUncharacterized protein. (198 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
   0.859
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.784
SRRM2
Serine/arginine repetitive matrix 2.
  
 
   0.751
SNRPF
Sm domain-containing protein.
    
 
 0.712
SYF2
SYF2 pre-mRNA splicing factor.
   
   0.706
CWC15
CWC15 spliceosome associated protein homolog.
   
 
 0.698
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
    
 
 0.693
SNW1
SNW domain containing 1.
   
 
 0.692
XAB2
XPA binding protein 2.
   
 
 0.689
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
   0.688
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.