BBS5 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS1	BBS2	ENSGGOP00000012924	ENSGGOP00000015661	BBS1 domain-containing protein.	Bardet-Biedl syndrome 2 protein homolog.	0.999
BBS1	BBS4	ENSGGOP00000012924	ENSGGOP00000003833	BBS1 domain-containing protein.	Bardet-Biedl syndrome 4.	0.995
BBS1	BBS5	ENSGGOP00000012924	ENSGGOP00000051495	BBS1 domain-containing protein.	Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...]	0.992
BBS1	BBS7	ENSGGOP00000012924	ENSGGOP00000002139	BBS1 domain-containing protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.999
BBS1	BBS9	ENSGGOP00000012924	ENSGGOP00000048769	BBS1 domain-containing protein.	Bardet-Biedl syndrome 9.	0.999
BBS1	ENSGGOP00000031369	ENSGGOP00000012924	ENSGGOP00000031369	BBS1 domain-containing protein.	BBSome interacting protein 1.	0.951
BBS1	ENSGGOP00000041284	ENSGGOP00000012924	ENSGGOP00000041284	BBS1 domain-containing protein.	Tetratricopeptide repeat domain 8.	0.993
BBS1	IFT80	ENSGGOP00000012924	ENSGGOP00000043750	BBS1 domain-containing protein.	Intraflagellar transport 80.	0.544
BBS1	LZTFL1	ENSGGOP00000012924	ENSGGOP00000038817	BBS1 domain-containing protein.	Leucine zipper transcription factor like 1.	0.947
BBS2	BBS1	ENSGGOP00000015661	ENSGGOP00000012924	Bardet-Biedl syndrome 2 protein homolog.	BBS1 domain-containing protein.	0.999
BBS2	BBS4	ENSGGOP00000015661	ENSGGOP00000003833	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 4.	0.997
BBS2	BBS5	ENSGGOP00000015661	ENSGGOP00000051495	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...]	0.997
BBS2	BBS7	ENSGGOP00000015661	ENSGGOP00000002139	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.999
BBS2	BBS9	ENSGGOP00000015661	ENSGGOP00000048769	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 9.	0.999
BBS2	ENSGGOP00000031369	ENSGGOP00000015661	ENSGGOP00000031369	Bardet-Biedl syndrome 2 protein homolog.	BBSome interacting protein 1.	0.959
BBS2	ENSGGOP00000041284	ENSGGOP00000015661	ENSGGOP00000041284	Bardet-Biedl syndrome 2 protein homolog.	Tetratricopeptide repeat domain 8.	0.996
BBS2	IFT80	ENSGGOP00000015661	ENSGGOP00000043750	Bardet-Biedl syndrome 2 protein homolog.	Intraflagellar transport 80.	0.600
BBS2	LZTFL1	ENSGGOP00000015661	ENSGGOP00000038817	Bardet-Biedl syndrome 2 protein homolog.	Leucine zipper transcription factor like 1.	0.990
BBS4	BBS1	ENSGGOP00000003833	ENSGGOP00000012924	Bardet-Biedl syndrome 4.	BBS1 domain-containing protein.	0.995
BBS4	BBS2	ENSGGOP00000003833	ENSGGOP00000015661	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 2 protein homolog.	0.997