STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
1OKO_GORGOClass I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system. (365 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).
   
 0.920
CD8A
CD8a molecule.
   
 0.879
G3RVT8_GORGO
Ig-like domain-containing protein.
    
  0.847
TAPBP
TAP binding protein.
   
 0.845
G3RAL4_GORGO
Major histocompatibility complex, class I, E; Belongs to the MHC class I family.
  
0.838
CALR
Calreticulin.
    
 0.825
G3S7I2_GORGO
T cell receptor alpha constant.
    
  0.722
G3S8P9_GORGO
Major histocompatibility complex, class II, DQ alpha 1; Belongs to the MHC class II family.
   
 0.715
CD3E
CD3e molecule.
    
 0.698
KLRD1
Killer cell lectin like receptor D1.
    
 0.696
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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