Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EP300 | GATA1 | ENSGGOP00000008032 | ENSGGOP00000018626 | E1A binding protein p300. | GATA binding protein 1. | 0.870 |
EP300 | GATA2 | ENSGGOP00000008032 | ENSGGOP00000006023 | E1A binding protein p300. | GATA binding protein 2. | 0.777 |
EP300 | LDB2 | ENSGGOP00000008032 | ENSGGOP00000052278 | E1A binding protein p300. | LIM domain binding 2. | 0.465 |
EP300 | LMO2 | ENSGGOP00000008032 | ENSGGOP00000035965 | E1A binding protein p300. | LIM domain only 2. | 0.508 |
EP300 | MYB | ENSGGOP00000008032 | ENSGGOP00000001363 | E1A binding protein p300. | MYB proto-oncogene, transcription factor. | 0.956 |
EP300 | RUNX1 | ENSGGOP00000008032 | ENSGGOP00000034825 | E1A binding protein p300. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.886 |
EP300 | SPI1 | ENSGGOP00000008032 | ENSGGOP00000006346 | E1A binding protein p300. | Spi-1 proto-oncogene. | 0.933 |
EP300 | TAL1 | ENSGGOP00000008032 | ENSGGOP00000033996 | E1A binding protein p300. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.745 |
EP300 | TCF12 | ENSGGOP00000008032 | ENSGGOP00000007993 | E1A binding protein p300. | Transcription factor 12. | 0.902 |
FLI1 | GATA1 | ENSGGOP00000045739 | ENSGGOP00000018626 | Fli-1 proto-oncogene, ETS transcription factor. | GATA binding protein 1. | 0.578 |
FLI1 | GATA2 | ENSGGOP00000045739 | ENSGGOP00000006023 | Fli-1 proto-oncogene, ETS transcription factor. | GATA binding protein 2. | 0.920 |
FLI1 | MYB | ENSGGOP00000045739 | ENSGGOP00000001363 | Fli-1 proto-oncogene, ETS transcription factor. | MYB proto-oncogene, transcription factor. | 0.866 |
FLI1 | RUNX1 | ENSGGOP00000045739 | ENSGGOP00000034825 | Fli-1 proto-oncogene, ETS transcription factor. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.930 |
FLI1 | SPI1 | ENSGGOP00000045739 | ENSGGOP00000006346 | Fli-1 proto-oncogene, ETS transcription factor. | Spi-1 proto-oncogene. | 0.868 |
FLI1 | TAL1 | ENSGGOP00000045739 | ENSGGOP00000033996 | Fli-1 proto-oncogene, ETS transcription factor. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.900 |
GATA1 | EP300 | ENSGGOP00000018626 | ENSGGOP00000008032 | GATA binding protein 1. | E1A binding protein p300. | 0.870 |
GATA1 | FLI1 | ENSGGOP00000018626 | ENSGGOP00000045739 | GATA binding protein 1. | Fli-1 proto-oncogene, ETS transcription factor. | 0.578 |
GATA1 | GATA2 | ENSGGOP00000018626 | ENSGGOP00000006023 | GATA binding protein 1. | GATA binding protein 2. | 0.824 |
GATA1 | LDB2 | ENSGGOP00000018626 | ENSGGOP00000052278 | GATA binding protein 1. | LIM domain binding 2. | 0.903 |
GATA1 | LMO2 | ENSGGOP00000018626 | ENSGGOP00000035965 | GATA binding protein 1. | LIM domain only 2. | 0.989 |
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