STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF4BPre-mRNA processing factor 4B. (1007 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
 0.945
TCERG1
Transcription elongation regulator 1.
   
 0.938
ENSGGOP00000041470
Splicing factor 3b subunit 1.
   
 
 0.932
G3RK55_GORGO
Pre-mRNA processing factor 31.
    
 
 0.909
PRPF6
Pre-mRNA processing factor 6.
    
 
 0.909
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.904
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 
 0.900
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.898
PRPF4
Pre-mRNA processing factor 4.
    
 
 0.898
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 
 0.897
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.