TMED6 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP76	LARGE2	ENSGGOP00000008337	ENSGGOP00000002263	Centrosomal protein 76.	LARGE xylosyl- and glucuronyltransferase 2.	0.730
CEP76	NUDT22	ENSGGOP00000008337	ENSGGOP00000050056	Centrosomal protein 76.	Nudix hydrolase 22.	0.610
CEP76	QPCTL	ENSGGOP00000008337	ENSGGOP00000018231	Centrosomal protein 76.	Glutaminyl-peptide cyclotransferase like.	0.466
CEP76	TMED6	ENSGGOP00000008337	ENSGGOP00000007582	Centrosomal protein 76.	GOLD domain-containing protein.	0.762
CEP76	TRABD	ENSGGOP00000008337	ENSGGOP00000014045	Centrosomal protein 76.	TraB domain containing.	0.626
CEP76	TTC7B	ENSGGOP00000008337	ENSGGOP00000047046	Centrosomal protein 76.	Tetratricopeptide repeat domain 7B.	0.483
COG8	TMED6	ENSGGOP00000007575	ENSGGOP00000007582	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	GOLD domain-containing protein.	0.747
COPZ2	LARGE2	ENSGGOP00000027504	ENSGGOP00000002263	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	LARGE xylosyl- and glucuronyltransferase 2.	0.690
COPZ2	NUDT22	ENSGGOP00000027504	ENSGGOP00000050056	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Nudix hydrolase 22.	0.736
COPZ2	OSTM1	ENSGGOP00000027504	ENSGGOP00000008829	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Osteoclastogenesis associated transmembrane protein 1.	0.696
COPZ2	QPCTL	ENSGGOP00000027504	ENSGGOP00000018231	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Glutaminyl-peptide cyclotransferase like.	0.690
COPZ2	TMED2	ENSGGOP00000027504	ENSGGOP00000028359	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Transmembrane p24 trafficking protein 2.	0.623
COPZ2	TMED6	ENSGGOP00000027504	ENSGGOP00000007582	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	GOLD domain-containing protein.	0.707
COPZ2	TRABD	ENSGGOP00000027504	ENSGGOP00000014045	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	TraB domain containing.	0.779
COPZ2	TTC7B	ENSGGOP00000027504	ENSGGOP00000047046	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Tetratricopeptide repeat domain 7B.	0.617
LARGE2	CEP76	ENSGGOP00000002263	ENSGGOP00000008337	LARGE xylosyl- and glucuronyltransferase 2.	Centrosomal protein 76.	0.730
LARGE2	COPZ2	ENSGGOP00000002263	ENSGGOP00000027504	LARGE xylosyl- and glucuronyltransferase 2.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.690
LARGE2	NUDT22	ENSGGOP00000002263	ENSGGOP00000050056	LARGE xylosyl- and glucuronyltransferase 2.	Nudix hydrolase 22.	0.754
LARGE2	OSTM1	ENSGGOP00000002263	ENSGGOP00000008829	LARGE xylosyl- and glucuronyltransferase 2.	Osteoclastogenesis associated transmembrane protein 1.	0.705
LARGE2	QPCTL	ENSGGOP00000002263	ENSGGOP00000018231	LARGE xylosyl- and glucuronyltransferase 2.	Glutaminyl-peptide cyclotransferase like.	0.711