Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CREBBP | G3QU62_GORGO | ENSGGOP00000005899 | ENSGGOP00000006258 | CREB binding protein. | MYB binding protein 1a. | 0.439 |
CREBBP | ZNF106 | ENSGGOP00000005899 | ENSGGOP00000007617 | CREB binding protein. | Zinc finger protein 106. | 0.482 |
DHX29 | PROM2 | ENSGGOP00000001836 | ENSGGOP00000006343 | ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. | Prominin 2. | 0.445 |
DHX29 | SCAF11 | ENSGGOP00000001836 | ENSGGOP00000018427 | ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. | SR-related CTD associated factor 11. | 0.510 |
DHX29 | SPAG5 | ENSGGOP00000001836 | ENSGGOP00000018369 | ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. | Sperm associated antigen 5. | 0.459 |
DHX29 | ZNF106 | ENSGGOP00000001836 | ENSGGOP00000007617 | ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. | Zinc finger protein 106. | 0.483 |
ENSGGOP00000048677 | G3QU62_GORGO | ENSGGOP00000048677 | ENSGGOP00000006258 | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | MYB binding protein 1a. | 0.731 |
ENSGGOP00000048677 | ZNF106 | ENSGGOP00000048677 | ENSGGOP00000007617 | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | Zinc finger protein 106. | 0.684 |
G3QU62_GORGO | CREBBP | ENSGGOP00000006258 | ENSGGOP00000005899 | MYB binding protein 1a. | CREB binding protein. | 0.439 |
G3QU62_GORGO | ENSGGOP00000048677 | ENSGGOP00000006258 | ENSGGOP00000048677 | MYB binding protein 1a. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.731 |
G3QU62_GORGO | ZNF106 | ENSGGOP00000006258 | ENSGGOP00000007617 | MYB binding protein 1a. | Zinc finger protein 106. | 0.694 |
HSPA4 | ZNF106 | ENSGGOP00000029381 | ENSGGOP00000007617 | Heat shock protein family A (Hsp70) member 4. | Zinc finger protein 106. | 0.587 |
PROM2 | DHX29 | ENSGGOP00000006343 | ENSGGOP00000001836 | Prominin 2. | ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. | 0.445 |
PROM2 | SCAF11 | ENSGGOP00000006343 | ENSGGOP00000018427 | Prominin 2. | SR-related CTD associated factor 11. | 0.467 |
PROM2 | SHROOM4 | ENSGGOP00000006343 | ENSGGOP00000034158 | Prominin 2. | Shroom family member 4. | 0.496 |
PROM2 | SPAG5 | ENSGGOP00000006343 | ENSGGOP00000018369 | Prominin 2. | Sperm associated antigen 5. | 0.446 |
PROM2 | ZNF106 | ENSGGOP00000006343 | ENSGGOP00000007617 | Prominin 2. | Zinc finger protein 106. | 0.563 |
PROM2 | ZNHIT2 | ENSGGOP00000006343 | ENSGGOP00000002674 | Prominin 2. | Zinc finger HIT-type containing 2. | 0.453 |
SCAF11 | DHX29 | ENSGGOP00000018427 | ENSGGOP00000001836 | SR-related CTD associated factor 11. | ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. | 0.510 |
SCAF11 | PROM2 | ENSGGOP00000018427 | ENSGGOP00000006343 | SR-related CTD associated factor 11. | Prominin 2. | 0.467 |
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