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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD4Jumonji domain containing 4. (463 aa)    
Predicted Functional Partners:
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
   
  
 0.783
ALKBH4
AlkB homolog 4, lysine demethylase.
   
  
 0.699
ENSGGOP00000033540
AlkB homolog 7.
   
  
 0.690
ALKBH5
AlkB homolog 5, RNA demethylase.
   
  
 0.680
ALKBH6
AlkB homolog 6.
      
 0.672
G3QRB4_GORGO
Proline and serine rich coiled-coil 1.
      
 0.561
SNAP47
Synaptosome associated protein 47.
      
 0.561
VPS54
VPS54 subunit of GARP complex.
      
 0.561
ETF1
Uncharacterized protein.
    
 
 0.517
ENSGGOP00000031276
eRF1_1 domain-containing protein.
    
 
 0.517
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.