PBX3 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAM222A	MAB21L1	ENSGGOP00000000979	ENSGGOP00000011475	Family with sequence similarity 222 member A.	Mab-21 like 1.	0.828
FAM222A	MAB21L2	ENSGGOP00000000979	ENSGGOP00000013743	Family with sequence similarity 222 member A.	Mab-21 like 2.	0.657
FAM222A	MEIS1	ENSGGOP00000000979	ENSGGOP00000034765	Family with sequence similarity 222 member A.	Homeobox domain-containing protein.	0.820
FAM222A	MEIS2	ENSGGOP00000000979	ENSGGOP00000023570	Family with sequence similarity 222 member A.	Meis homeobox 2.	0.828
FAM222A	PBX1	ENSGGOP00000000979	ENSGGOP00000011021	Family with sequence similarity 222 member A.	PBX homeobox 1.	0.817
FAM222A	PBX3	ENSGGOP00000000979	ENSGGOP00000008823	Family with sequence similarity 222 member A.	Homeobox domain-containing protein.	0.821
G3QM41_GORGO	MAB21L1	ENSGGOP00000003567	ENSGGOP00000011475	Uncharacterized protein.	Mab-21 like 1.	0.918
G3QM41_GORGO	MAB21L2	ENSGGOP00000003567	ENSGGOP00000013743	Uncharacterized protein.	Mab-21 like 2.	0.507
G3QM41_GORGO	MEIS1	ENSGGOP00000003567	ENSGGOP00000034765	Uncharacterized protein.	Homeobox domain-containing protein.	0.845
G3QM41_GORGO	MEIS2	ENSGGOP00000003567	ENSGGOP00000023570	Uncharacterized protein.	Meis homeobox 2.	0.923
G3QM41_GORGO	PBX1	ENSGGOP00000003567	ENSGGOP00000011021	Uncharacterized protein.	PBX homeobox 1.	0.851
G3QM41_GORGO	PBX3	ENSGGOP00000003567	ENSGGOP00000008823	Uncharacterized protein.	Homeobox domain-containing protein.	0.921
HOXA9	MEIS1	ENSGGOP00000002189	ENSGGOP00000034765	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox domain-containing protein.	0.838
HOXA9	MEIS2	ENSGGOP00000002189	ENSGGOP00000023570	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Meis homeobox 2.	0.768
HOXA9	PBX1	ENSGGOP00000002189	ENSGGOP00000011021	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	PBX homeobox 1.	0.796
HOXA9	PBX3	ENSGGOP00000002189	ENSGGOP00000008823	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox domain-containing protein.	0.762
HOXB1	MEIS1	ENSGGOP00000009674	ENSGGOP00000034765	Homeobox B1.	Homeobox domain-containing protein.	0.547
HOXB1	MEIS2	ENSGGOP00000009674	ENSGGOP00000023570	Homeobox B1.	Meis homeobox 2.	0.547
HOXB1	PBX1	ENSGGOP00000009674	ENSGGOP00000011021	Homeobox B1.	PBX homeobox 1.	0.939
HOXB1	PBX3	ENSGGOP00000009674	ENSGGOP00000008823	Homeobox B1.	Homeobox domain-containing protein.	0.789