G3R2B3_GORGO protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3R2B3_GORGO

Uncharacterized protein. (639 aa)

Predicted Functional Partners:

KIF5B

0.977

KIF5A

0.971

KIF5C

0.948

KLC4

0.924

KLC2

0.923

KLC3

0.882

MAPK8IP3

0.806

CLSTN1

0.800

G3RZJ6_GORGO

0.767

KIFAP3

0.763

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLSTN1	G3R2B3_GORGO	ENSGGOP00000027123	ENSGGOP00000009359	Calsyntenin 1.	Uncharacterized protein.	0.800
CLSTN1	KLC2	ENSGGOP00000027123	ENSGGOP00000047527	Calsyntenin 1.	Kinesin light chain 2.	0.882
CLSTN1	KLC3	ENSGGOP00000027123	ENSGGOP00000015440	Calsyntenin 1.	Kinesin light chain 3.	0.640
CLSTN1	KLC4	ENSGGOP00000027123	ENSGGOP00000009521	Calsyntenin 1.	Kinesin light chain 4.	0.814
G3R2B3_GORGO	CLSTN1	ENSGGOP00000009359	ENSGGOP00000027123	Uncharacterized protein.	Calsyntenin 1.	0.800
G3R2B3_GORGO	G3RZJ6_GORGO	ENSGGOP00000009359	ENSGGOP00000021239	Uncharacterized protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.767
G3R2B3_GORGO	KIF5A	ENSGGOP00000009359	ENSGGOP00000029075	Uncharacterized protein.	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.971
G3R2B3_GORGO	KIF5B	ENSGGOP00000009359	ENSGGOP00000013097	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.977
G3R2B3_GORGO	KIF5C	ENSGGOP00000009359	ENSGGOP00000050011	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.948
G3R2B3_GORGO	KIFAP3	ENSGGOP00000009359	ENSGGOP00000017237	Uncharacterized protein.	Kinesin associated protein 3.	0.763
G3R2B3_GORGO	KLC2	ENSGGOP00000009359	ENSGGOP00000047527	Uncharacterized protein.	Kinesin light chain 2.	0.923
G3R2B3_GORGO	KLC3	ENSGGOP00000009359	ENSGGOP00000015440	Uncharacterized protein.	Kinesin light chain 3.	0.882
G3R2B3_GORGO	KLC4	ENSGGOP00000009359	ENSGGOP00000009521	Uncharacterized protein.	Kinesin light chain 4.	0.924
G3R2B3_GORGO	MAPK8IP3	ENSGGOP00000009359	ENSGGOP00000006088	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 3.	0.806
G3RZJ6_GORGO	G3R2B3_GORGO	ENSGGOP00000021239	ENSGGOP00000009359	LEO1 homolog, Paf1/RNA polymerase II complex component.	Uncharacterized protein.	0.767
G3RZJ6_GORGO	KLC2	ENSGGOP00000021239	ENSGGOP00000047527	LEO1 homolog, Paf1/RNA polymerase II complex component.	Kinesin light chain 2.	0.767
G3RZJ6_GORGO	KLC3	ENSGGOP00000021239	ENSGGOP00000015440	LEO1 homolog, Paf1/RNA polymerase II complex component.	Kinesin light chain 3.	0.767
G3RZJ6_GORGO	KLC4	ENSGGOP00000021239	ENSGGOP00000009521	LEO1 homolog, Paf1/RNA polymerase II complex component.	Kinesin light chain 4.	0.767
KIF5A	G3R2B3_GORGO	ENSGGOP00000029075	ENSGGOP00000009359	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.971
KIF5A	KIF5B	ENSGGOP00000029075	ENSGGOP00000013097	Kinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.961