MDH2 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5F1A	ATP5F1B	ENSGGOP00000039978	ENSGGOP00000011311	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ATP5F1A	CS	ENSGGOP00000039978	ENSGGOP00000022736	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Citrate synthase; Belongs to the citrate synthase family.	0.786
ATP5F1A	ENSGGOP00000046396	ENSGGOP00000039978	ENSGGOP00000046396	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.786
ATP5F1A	ENSGGOP00000051025	ENSGGOP00000039978	ENSGGOP00000051025	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Aminotran_1_2 domain-containing protein.	0.615
ATP5F1A	FH	ENSGGOP00000039978	ENSGGOP00000009758	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Fumarate hydratase.	0.784
ATP5F1A	GOT2	ENSGGOP00000039978	ENSGGOP00000005648	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Aspartate aminotransferase.	0.622
ATP5F1A	MDH1	ENSGGOP00000039978	ENSGGOP00000039797	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Malate dehydrogenase.	0.724
ATP5F1A	MDH2	ENSGGOP00000039978	ENSGGOP00000011503	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Malate dehydrogenase.	0.976
ATP5F1B	ATP5F1A	ENSGGOP00000011311	ENSGGOP00000039978	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
ATP5F1B	CS	ENSGGOP00000011311	ENSGGOP00000022736	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Citrate synthase; Belongs to the citrate synthase family.	0.833
ATP5F1B	ENSGGOP00000046396	ENSGGOP00000011311	ENSGGOP00000046396	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.833
ATP5F1B	ENSGGOP00000051025	ENSGGOP00000011311	ENSGGOP00000051025	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Aminotran_1_2 domain-containing protein.	0.482
ATP5F1B	FH	ENSGGOP00000011311	ENSGGOP00000009758	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Fumarate hydratase.	0.783
ATP5F1B	GOT2	ENSGGOP00000011311	ENSGGOP00000005648	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Aspartate aminotransferase.	0.482
ATP5F1B	MDH1	ENSGGOP00000011311	ENSGGOP00000039797	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Malate dehydrogenase.	0.527
ATP5F1B	MDH2	ENSGGOP00000011311	ENSGGOP00000011503	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Malate dehydrogenase.	0.986
CS	ATP5F1A	ENSGGOP00000022736	ENSGGOP00000039978	Citrate synthase; Belongs to the citrate synthase family.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.786
CS	ATP5F1B	ENSGGOP00000022736	ENSGGOP00000011311	Citrate synthase; Belongs to the citrate synthase family.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.833
CS	ENSGGOP00000051025	ENSGGOP00000022736	ENSGGOP00000051025	Citrate synthase; Belongs to the citrate synthase family.	Aminotran_1_2 domain-containing protein.	0.767
CS	FH	ENSGGOP00000022736	ENSGGOP00000009758	Citrate synthase; Belongs to the citrate synthase family.	Fumarate hydratase.	0.981