STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3R8M3_GORGOTLC domain containing 3B. (274 aa)    
Predicted Functional Partners:
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
   
  
 0.675
G3QH20_GORGO
Serine palmitoyltransferase long chain base subunit 1.
   
  
 0.673
SGPP1
Sphingosine-1-phosphate phosphatase 1.
      
 0.673
G3RT65_GORGO
Sphingosine kinase 2.
      
 0.672
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
   
  
 0.671
SMPD1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
      
 0.615
UBP1
Upstream binding protein 1.
      
 0.571
ACSL5
Acyl-CoA synthetase long chain family member 5.
   
  
 0.545
CERS2
Ceramide synthase 2.
   
  
 0.540
CERS6
Ceramide synthase 6.
   
  
 0.539
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.