Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDC14 | G3SC62_GORGO | ENSGGOP00000006669 | ENSGGOP00000025689 | Coiled-coil domain containing 14. | Pericentriolar material 1. | 0.542 |
CCDC14 | MIB1 | ENSGGOP00000006669 | ENSGGOP00000012422 | Coiled-coil domain containing 14. | Mindbomb E3 ubiquitin protein ligase 1. | 0.479 |
DAPK1 | MIB1 | ENSGGOP00000000085 | ENSGGOP00000012422 | Death associated protein kinase 1. | Mindbomb E3 ubiquitin protein ligase 1. | 0.548 |
ENSGGOP00000031377 | MIB1 | ENSGGOP00000031377 | ENSGGOP00000012422 | Bromodomain containing 2. | Mindbomb E3 ubiquitin protein ligase 1. | 0.576 |
G3SC62_GORGO | CCDC14 | ENSGGOP00000025689 | ENSGGOP00000006669 | Pericentriolar material 1. | Coiled-coil domain containing 14. | 0.542 |
G3SC62_GORGO | MIB1 | ENSGGOP00000025689 | ENSGGOP00000012422 | Pericentriolar material 1. | Mindbomb E3 ubiquitin protein ligase 1. | 0.747 |
G3SC62_GORGO | PCNT | ENSGGOP00000025689 | ENSGGOP00000011540 | Pericentriolar material 1. | Pericentrin. | 0.903 |
JAG1 | MIB1 | ENSGGOP00000020660 | ENSGGOP00000012422 | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | Mindbomb E3 ubiquitin protein ligase 1. | 0.627 |
MAT2B | MIB1 | ENSGGOP00000024515 | ENSGGOP00000012422 | Methionine adenosyltransferase 2 subunit beta; Regulatory subunit of S-adenosylmethionine synthetase 2, an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates MAT2A catalytic activity by changing its kinetic properties, increasing its affinity for L-methionine. | Mindbomb E3 ubiquitin protein ligase 1. | 0.602 |
MAT2B | SHPRH | ENSGGOP00000024515 | ENSGGOP00000021425 | Methionine adenosyltransferase 2 subunit beta; Regulatory subunit of S-adenosylmethionine synthetase 2, an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates MAT2A catalytic activity by changing its kinetic properties, increasing its affinity for L-methionine. | SNF2 histone linker PHD RING helicase. | 0.421 |
MAT2B | ZNF609 | ENSGGOP00000024515 | ENSGGOP00000000852 | Methionine adenosyltransferase 2 subunit beta; Regulatory subunit of S-adenosylmethionine synthetase 2, an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates MAT2A catalytic activity by changing its kinetic properties, increasing its affinity for L-methionine. | Zinc finger protein 609. | 0.529 |
MIB1 | CCDC14 | ENSGGOP00000012422 | ENSGGOP00000006669 | Mindbomb E3 ubiquitin protein ligase 1. | Coiled-coil domain containing 14. | 0.479 |
MIB1 | DAPK1 | ENSGGOP00000012422 | ENSGGOP00000000085 | Mindbomb E3 ubiquitin protein ligase 1. | Death associated protein kinase 1. | 0.548 |
MIB1 | ENSGGOP00000031377 | ENSGGOP00000012422 | ENSGGOP00000031377 | Mindbomb E3 ubiquitin protein ligase 1. | Bromodomain containing 2. | 0.576 |
MIB1 | G3SC62_GORGO | ENSGGOP00000012422 | ENSGGOP00000025689 | Mindbomb E3 ubiquitin protein ligase 1. | Pericentriolar material 1. | 0.747 |
MIB1 | JAG1 | ENSGGOP00000012422 | ENSGGOP00000020660 | Mindbomb E3 ubiquitin protein ligase 1. | Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. | 0.627 |
MIB1 | MAT2B | ENSGGOP00000012422 | ENSGGOP00000024515 | Mindbomb E3 ubiquitin protein ligase 1. | Methionine adenosyltransferase 2 subunit beta; Regulatory subunit of S-adenosylmethionine synthetase 2, an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates MAT2A catalytic activity by changing its kinetic properties, increasing its affinity for L-methionine. | 0.602 |
MIB1 | PCNT | ENSGGOP00000012422 | ENSGGOP00000011540 | Mindbomb E3 ubiquitin protein ligase 1. | Pericentrin. | 0.555 |
MIB1 | SHPRH | ENSGGOP00000012422 | ENSGGOP00000021425 | Mindbomb E3 ubiquitin protein ligase 1. | SNF2 histone linker PHD RING helicase. | 0.567 |
MIB1 | ZMYM4 | ENSGGOP00000012422 | ENSGGOP00000038667 | Mindbomb E3 ubiquitin protein ligase 1. | Zinc finger MYM-type containing 4. | 0.794 |
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