STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1006 aa)    
Predicted Functional Partners:
ZMYM4
Zinc finger MYM-type containing 4.
   
  0.794
G3SC62_GORGO
Pericentriolar material 1.
    
 0.747
ZNF609
Zinc finger protein 609.
      
 0.633
JAG1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.627
MAT2B
Methionine adenosyltransferase 2 subunit beta; Regulatory subunit of S-adenosylmethionine synthetase 2, an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates MAT2A catalytic activity by changing its kinetic properties, increasing its affinity for L-methionine.
   
 
 0.602
ENSGGOP00000031377
Bromodomain containing 2.
    
 
 0.576
SHPRH
SNF2 histone linker PHD RING helicase.
   
 0.567
PCNT
Pericentrin.
    
  0.555
DAPK1
Death associated protein kinase 1.
   
0.548
CCDC14
Coiled-coil domain containing 14.
    
 0.479
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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