| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BDNF | TBX4 | ENSGGOP00000032053 | ENSGGOP00000013563 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | T-box transcription factor 4. | 0.701 |
| BMP2 | FGFBP1 | ENSGGOP00000021281 | ENSGGOP00000015735 | Bone morphogenetic protein 2. | Fibroblast growth factor binding protein 1. | 0.691 |
| BMP2 | PROM1 | ENSGGOP00000021281 | ENSGGOP00000024167 | Bone morphogenetic protein 2. | Prominin 1. | 0.413 |
| BMP2 | TBL1XR1 | ENSGGOP00000021281 | ENSGGOP00000009311 | Bone morphogenetic protein 2. | Transducin beta like 1 X-linked receptor 1. | 0.606 |
| BMP2 | TBX4 | ENSGGOP00000021281 | ENSGGOP00000013563 | Bone morphogenetic protein 2. | T-box transcription factor 4. | 0.635 |
| FGFBP1 | BMP2 | ENSGGOP00000015735 | ENSGGOP00000021281 | Fibroblast growth factor binding protein 1. | Bone morphogenetic protein 2. | 0.691 |
| FGFBP1 | PROM1 | ENSGGOP00000015735 | ENSGGOP00000024167 | Fibroblast growth factor binding protein 1. | Prominin 1. | 0.783 |
| FGFBP1 | TBL1XR1 | ENSGGOP00000015735 | ENSGGOP00000009311 | Fibroblast growth factor binding protein 1. | Transducin beta like 1 X-linked receptor 1. | 0.797 |
| FGFBP1 | TBX4 | ENSGGOP00000015735 | ENSGGOP00000013563 | Fibroblast growth factor binding protein 1. | T-box transcription factor 4. | 0.774 |
| HOXC10 | TBX4 | ENSGGOP00000001089 | ENSGGOP00000013563 | Homeobox C10. | T-box transcription factor 4. | 0.624 |
| NKX2-5 | TBX4 | ENSGGOP00000016680 | ENSGGOP00000013563 | NK2 homeobox 5. | T-box transcription factor 4. | 0.860 |
| PITX1 | TBX4 | ENSGGOP00000004748 | ENSGGOP00000013563 | Homeobox protein. | T-box transcription factor 4. | 0.791 |
| PROM1 | BMP2 | ENSGGOP00000024167 | ENSGGOP00000021281 | Prominin 1. | Bone morphogenetic protein 2. | 0.413 |
| PROM1 | FGFBP1 | ENSGGOP00000024167 | ENSGGOP00000015735 | Prominin 1. | Fibroblast growth factor binding protein 1. | 0.783 |
| PROM1 | TBL1XR1 | ENSGGOP00000024167 | ENSGGOP00000009311 | Prominin 1. | Transducin beta like 1 X-linked receptor 1. | 0.948 |
| PROM1 | TBX4 | ENSGGOP00000024167 | ENSGGOP00000013563 | Prominin 1. | T-box transcription factor 4. | 0.954 |
| SOX30 | TBX4 | ENSGGOP00000028163 | ENSGGOP00000013563 | SRY-box transcription factor 30. | T-box transcription factor 4. | 0.600 |
| TBL1XR1 | BMP2 | ENSGGOP00000009311 | ENSGGOP00000021281 | Transducin beta like 1 X-linked receptor 1. | Bone morphogenetic protein 2. | 0.606 |
| TBL1XR1 | FGFBP1 | ENSGGOP00000009311 | ENSGGOP00000015735 | Transducin beta like 1 X-linked receptor 1. | Fibroblast growth factor binding protein 1. | 0.797 |
| TBL1XR1 | PROM1 | ENSGGOP00000009311 | ENSGGOP00000024167 | Transducin beta like 1 X-linked receptor 1. | Prominin 1. | 0.948 |
