RAN protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000033669	G3QW19_GORGO	ENSGGOP00000033669	ENSGGOP00000006961	RanBD1 domain-containing protein.	Uncharacterized protein.	0.889
ENSGGOP00000033669	KPNB1	ENSGGOP00000033669	ENSGGOP00000007915	RanBD1 domain-containing protein.	Karyopherin subunit beta 1.	0.847
ENSGGOP00000033669	NUTF2	ENSGGOP00000033669	ENSGGOP00000022156	RanBD1 domain-containing protein.	Nuclear transport factor 2.	0.532
ENSGGOP00000033669	RAN	ENSGGOP00000033669	ENSGGOP00000042856	RanBD1 domain-containing protein.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.887
ENSGGOP00000033669	RANGAP1	ENSGGOP00000033669	ENSGGOP00000025977	RanBD1 domain-containing protein.	Ran GTPase activating protein 1.	0.836
ENSGGOP00000033669	UBE2I	ENSGGOP00000033669	ENSGGOP00000034313	RanBD1 domain-containing protein.	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.	0.656
ENSGGOP00000033669	XPO1	ENSGGOP00000033669	ENSGGOP00000044145	RanBD1 domain-containing protein.	Exportin 1.	0.764
ENSGGOP00000033669	XPO5	ENSGGOP00000033669	ENSGGOP00000007781	RanBD1 domain-containing protein.	Exportin 5.	0.550
ENSGGOP00000034737	G3QW19_GORGO	ENSGGOP00000034737	ENSGGOP00000006961	RanBD1 domain-containing protein.	Uncharacterized protein.	0.923
ENSGGOP00000034737	KPNB1	ENSGGOP00000034737	ENSGGOP00000007915	RanBD1 domain-containing protein.	Karyopherin subunit beta 1.	0.885
ENSGGOP00000034737	NUTF2	ENSGGOP00000034737	ENSGGOP00000022156	RanBD1 domain-containing protein.	Nuclear transport factor 2.	0.588
ENSGGOP00000034737	RAN	ENSGGOP00000034737	ENSGGOP00000042856	RanBD1 domain-containing protein.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.916
ENSGGOP00000034737	RANGAP1	ENSGGOP00000034737	ENSGGOP00000025977	RanBD1 domain-containing protein.	Ran GTPase activating protein 1.	0.863
ENSGGOP00000034737	UBE2I	ENSGGOP00000034737	ENSGGOP00000034313	RanBD1 domain-containing protein.	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.	0.656
ENSGGOP00000034737	XPO1	ENSGGOP00000034737	ENSGGOP00000044145	RanBD1 domain-containing protein.	Exportin 1.	0.794
ENSGGOP00000034737	XPO5	ENSGGOP00000034737	ENSGGOP00000007781	RanBD1 domain-containing protein.	Exportin 5.	0.550
G3QES4_GORGO	G3QW19_GORGO	ENSGGOP00000000773	ENSGGOP00000006961	RAN binding protein 1.	Uncharacterized protein.	0.923
G3QES4_GORGO	KPNB1	ENSGGOP00000000773	ENSGGOP00000007915	RAN binding protein 1.	Karyopherin subunit beta 1.	0.885
G3QES4_GORGO	NUTF2	ENSGGOP00000000773	ENSGGOP00000022156	RAN binding protein 1.	Nuclear transport factor 2.	0.588
G3QES4_GORGO	RAN	ENSGGOP00000000773	ENSGGOP00000042856	RAN binding protein 1.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.916