SPATA25 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000037665	SPATA25	ENSGGOP00000037665	ENSGGOP00000015534	TFIID_20kDa domain-containing protein.	Spermatogenesis associated 25.	0.822
ENSGGOP00000037665	TAF1	ENSGGOP00000037665	ENSGGOP00000032839	TFIID_20kDa domain-containing protein.	Transcription initiation factor TFIID subunit.	0.992
ENSGGOP00000037665	TAF10	ENSGGOP00000037665	ENSGGOP00000039527	TFIID_20kDa domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.998
ENSGGOP00000037665	TAF2	ENSGGOP00000037665	ENSGGOP00000007336	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 2.	0.993
ENSGGOP00000037665	TAF3	ENSGGOP00000037665	ENSGGOP00000016296	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 3.	0.989
ENSGGOP00000037665	TAF4	ENSGGOP00000037665	ENSGGOP00000002080	TFIID_20kDa domain-containing protein.	TAFH domain-containing protein.	0.997
ENSGGOP00000037665	TAF5	ENSGGOP00000037665	ENSGGOP00000005330	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.997
ENSGGOP00000037665	TAF6	ENSGGOP00000037665	ENSGGOP00000002710	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 6.	0.998
ENSGGOP00000037665	TAF8	ENSGGOP00000037665	ENSGGOP00000021422	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 8.	0.998
ENSGGOP00000037665	TAF9B	ENSGGOP00000037665	ENSGGOP00000002430	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 9b.	0.986
SPATA25	ENSGGOP00000037665	ENSGGOP00000015534	ENSGGOP00000037665	Spermatogenesis associated 25.	TFIID_20kDa domain-containing protein.	0.822
SPATA25	TAF1	ENSGGOP00000015534	ENSGGOP00000032839	Spermatogenesis associated 25.	Transcription initiation factor TFIID subunit.	0.805
SPATA25	TAF10	ENSGGOP00000015534	ENSGGOP00000039527	Spermatogenesis associated 25.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.834
SPATA25	TAF2	ENSGGOP00000015534	ENSGGOP00000007336	Spermatogenesis associated 25.	TATA-box binding protein associated factor 2.	0.810
SPATA25	TAF3	ENSGGOP00000015534	ENSGGOP00000016296	Spermatogenesis associated 25.	TATA-box binding protein associated factor 3.	0.822
SPATA25	TAF4	ENSGGOP00000015534	ENSGGOP00000002080	Spermatogenesis associated 25.	TAFH domain-containing protein.	0.821
SPATA25	TAF5	ENSGGOP00000015534	ENSGGOP00000005330	Spermatogenesis associated 25.	Uncharacterized protein.	0.793
SPATA25	TAF6	ENSGGOP00000015534	ENSGGOP00000002710	Spermatogenesis associated 25.	TATA-box binding protein associated factor 6.	0.794
SPATA25	TAF8	ENSGGOP00000015534	ENSGGOP00000021422	Spermatogenesis associated 25.	TATA-box binding protein associated factor 8.	0.885
SPATA25	TAF9B	ENSGGOP00000015534	ENSGGOP00000002430	Spermatogenesis associated 25.	TATA-box binding protein associated factor 9b.	0.807