RTKN2 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000039941	RHOA	ENSGGOP00000039941	ENSGGOP00000012527	Uncharacterized protein.	Uncharacterized protein.	0.745
ENSGGOP00000039941	RHOB	ENSGGOP00000039941	ENSGGOP00000030556	Uncharacterized protein.	Ras homolog family member B.	0.569
ENSGGOP00000039941	RHOC	ENSGGOP00000039941	ENSGGOP00000051168	Uncharacterized protein.	Ras homolog family member C.	0.684
ENSGGOP00000039941	RND1	ENSGGOP00000039941	ENSGGOP00000006914	Uncharacterized protein.	Rho family GTPase 1.	0.475
ENSGGOP00000039941	RND3	ENSGGOP00000039941	ENSGGOP00000038343	Uncharacterized protein.	Rho family GTPase 3.	0.475
ENSGGOP00000039941	RTKN2	ENSGGOP00000039941	ENSGGOP00000016531	Uncharacterized protein.	Rhotekin 2.	0.508
LIN7A	LIN7B	ENSGGOP00000035747	ENSGGOP00000008203	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	PDZ domain-containing protein.	0.716
LIN7A	LIN7C	ENSGGOP00000035747	ENSGGOP00000020851	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.997
LIN7A	RTKN2	ENSGGOP00000035747	ENSGGOP00000016531	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	Rhotekin 2.	0.605
LIN7B	LIN7A	ENSGGOP00000008203	ENSGGOP00000035747	PDZ domain-containing protein.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.716
LIN7B	LIN7C	ENSGGOP00000008203	ENSGGOP00000020851	PDZ domain-containing protein.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.937
LIN7B	RTKN2	ENSGGOP00000008203	ENSGGOP00000016531	PDZ domain-containing protein.	Rhotekin 2.	0.605
LIN7C	LIN7A	ENSGGOP00000020851	ENSGGOP00000035747	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.997
LIN7C	LIN7B	ENSGGOP00000020851	ENSGGOP00000008203	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	PDZ domain-containing protein.	0.937
LIN7C	RND1	ENSGGOP00000020851	ENSGGOP00000006914	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	Rho family GTPase 1.	0.497
LIN7C	RTKN2	ENSGGOP00000020851	ENSGGOP00000016531	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	Rhotekin 2.	0.605
RHOA	ENSGGOP00000039941	ENSGGOP00000012527	ENSGGOP00000039941	Uncharacterized protein.	Uncharacterized protein.	0.745
RHOA	RHOB	ENSGGOP00000012527	ENSGGOP00000030556	Uncharacterized protein.	Ras homolog family member B.	0.932
RHOA	RHOC	ENSGGOP00000012527	ENSGGOP00000051168	Uncharacterized protein.	Ras homolog family member C.	0.996
RHOA	RHPN1	ENSGGOP00000012527	ENSGGOP00000017166	Uncharacterized protein.	Rhophilin Rho GTPase binding protein 1.	0.709