Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMC3Laminin subunit gamma 3. (1575 aa)    
Predicted Functional Partners:
LAMB2
Laminin subunit beta 2.
   
 0.909
LAMB1
Laminin subunit beta 1.
   
 0.867
G3S7G1_GORGO
Laminin subunit alpha 2.
   
 0.860
LAMA4
Laminin subunit alpha 4.
   
 0.852
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
   
 0.838
DAG1
Dystroglycan 1.
   
 0.822
ITGB4
Integrin beta.
   
 0.810
NID2
Uncharacterized protein.
   
 0.802
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.800
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 0.799
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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