STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF8Pre-mRNA processing factor 8. (2335 aa)    
Predicted Functional Partners:
SF3B4
Splicing factor 3b subunit 4.
    
 0.999
SLU7
SLU7 homolog, splicing factor.
    
 
 0.999
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.999
PRPF6
Pre-mRNA processing factor 6.
   
 0.999
SF3B2
Splicing factor 3b subunit 2.
   
 0.999
ENSGGOP00000035693
Pre-mRNA processing factor 19.
   
 0.999
TXNL4A
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.996
G3RBJ7_GORGO
Pre-mRNA processing factor 3.
   
 0.996
G3RK55_GORGO
Pre-mRNA processing factor 31.
    
 0.994
SNRNP200
Uncharacterized protein.
   
 0.993
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.