B2M protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
1C03_GORGO	1OKO_GORGO	ENSGGOP00000006482	ENSGGOP00000022475	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	0.787
1C03_GORGO	B2M	ENSGGOP00000006482	ENSGGOP00000026553	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	0.960
1C03_GORGO	G3QYA4_GORGO	ENSGGOP00000006482	ENSGGOP00000007834	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class I, G; Belongs to the MHC class I family.	0.787
1C03_GORGO	G3R317_GORGO	ENSGGOP00000006482	ENSGGOP00000009633	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.432
1C03_GORGO	G3R3J7_GORGO	ENSGGOP00000006482	ENSGGOP00000009826	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	MHC_I-like_Ag-recog domain-containing protein.	0.788
1C03_GORGO	G3R5S5_GORGO	ENSGGOP00000006482	ENSGGOP00000010658	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class II, DO beta.	0.401
1C03_GORGO	G3RAL4_GORGO	ENSGGOP00000006482	ENSGGOP00000012487	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class I, E; Belongs to the MHC class I family.	0.787
1C03_GORGO	G3SJ91_GORGO	ENSGGOP00000006482	ENSGGOP00000028181	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class II, DQ beta 2.	0.401
1OKO_GORGO	1C03_GORGO	ENSGGOP00000022475	ENSGGOP00000006482	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	0.787
1OKO_GORGO	B2M	ENSGGOP00000022475	ENSGGOP00000026553	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	0.987
1OKO_GORGO	G3QYA4_GORGO	ENSGGOP00000022475	ENSGGOP00000007834	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class I, G; Belongs to the MHC class I family.	0.654
1OKO_GORGO	G3R317_GORGO	ENSGGOP00000022475	ENSGGOP00000009633	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.565
1OKO_GORGO	G3R3J7_GORGO	ENSGGOP00000022475	ENSGGOP00000009826	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	MHC_I-like_Ag-recog domain-containing protein.	0.656
1OKO_GORGO	G3R5S5_GORGO	ENSGGOP00000022475	ENSGGOP00000010658	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class II, DO beta.	0.447
1OKO_GORGO	G3RAL4_GORGO	ENSGGOP00000022475	ENSGGOP00000012487	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class I, E; Belongs to the MHC class I family.	0.992
1OKO_GORGO	G3SJ91_GORGO	ENSGGOP00000022475	ENSGGOP00000028181	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	Major histocompatibility complex, class II, DQ beta 2.	0.548
B2M	1C03_GORGO	ENSGGOP00000026553	ENSGGOP00000006482	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	Class I histocompatibility antigen, Gogo-C*0202 alpha chain; Involved in the presentation of foreign antigens to the immune system.	0.960
B2M	1OKO_GORGO	ENSGGOP00000026553	ENSGGOP00000022475	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	Class I histocompatibility antigen, Gogo-OKO alpha chain; Involved in the presentation of foreign antigens to the immune system.	0.987
B2M	CD1D	ENSGGOP00000026553	ENSGGOP00000011482	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	CD1d molecule.	0.956
B2M	G3QYA4_GORGO	ENSGGOP00000026553	ENSGGOP00000007834	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	Major histocompatibility complex, class I, G; Belongs to the MHC class I family.	0.955