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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LY6G5BUncharacterized protein. (298 aa)    
Predicted Functional Partners:
CSNK2A1
Casein kinase 2 alpha 1; Belongs to the protein kinase superfamily.
   
 0.985
G3RQ88_GORGO
Protein kinase domain-containing protein.
   
 0.970
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
   
 0.970
NOL6
Nucleolar protein 6.
   
 0.899
RRP7A
Ribosomal RNA processing 7 homolog A.
    
 0.897
SSRP1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
  0.895
PCGF5
Polycomb group ring finger 5.
    
 0.888
RYBP
RING1 and YY1 binding protein.
    
 0.864
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.859
ENSGGOP00000033975
Uncharacterized protein.
    
 0.859
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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