STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM42RNA binding motif protein 42. (480 aa)    
Predicted Functional Partners:
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.936
HAUS6
HAUS augmin like complex subunit 6.
   
 0.899
USP39
Ubiquitin specific peptidase 39.
   
  0.894
HAUS8
HAUS augmin like complex subunit 8.
    
 0.891
G3RHK3_GORGO
Uncharacterized protein.
    
 
 0.891
TXNL4A
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
  0.890
HAUS3
HAUS augmin like complex subunit 3.
   
 0.889
G3QFU4_GORGO
Small nuclear ribonucleoprotein polypeptide A.
   
  0.879
ENSGGOP00000043986
Uncharacterized protein.
   
 0.877
HAUS7
HAUS augmin like complex subunit 7.
    
 0.874
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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