STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC80Coiled-coil domain containing 80. (950 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.696
G3S6C1_GORGO
Ubiquitin-like domain-containing protein.
   
 0.696
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.673
G3QG88_GORGO
GLE1 RNA export mediator.
   
 0.480
G3R6A2_GORGO
Uncharacterized protein.
   
 
  0.475
COL3A1
Collagen type III alpha 1 chain.
   
 0.459
RPS28
Ribosomal protein S28.
   
   0.448
NID1
Nidogen 1.
  
 
 0.430
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.428
ASF1B
Anti-silencing function 1B histone chaperone.
    
 0.428
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.