IPO4 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASF1A	ASF1B	ENSGGOP00000009810	ENSGGOP00000012972	Anti-silencing function 1A histone chaperone.	Anti-silencing function 1B histone chaperone.	0.934
ASF1A	ENSGGOP00000032687	ENSGGOP00000009810	ENSGGOP00000032687	Anti-silencing function 1A histone chaperone.	Histone domain-containing protein.	0.870
ASF1A	ENSGGOP00000049889	ENSGGOP00000009810	ENSGGOP00000049889	Anti-silencing function 1A histone chaperone.	annotation not available	0.838
ASF1A	HAT1	ENSGGOP00000009810	ENSGGOP00000009140	Anti-silencing function 1A histone chaperone.	Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.	0.956
ASF1A	IPO4	ENSGGOP00000009810	ENSGGOP00000023342	Anti-silencing function 1A histone chaperone.	Importin 4.	0.960
ASF1B	ASF1A	ENSGGOP00000012972	ENSGGOP00000009810	Anti-silencing function 1B histone chaperone.	Anti-silencing function 1A histone chaperone.	0.934
ASF1B	ENSGGOP00000032687	ENSGGOP00000012972	ENSGGOP00000032687	Anti-silencing function 1B histone chaperone.	Histone domain-containing protein.	0.880
ASF1B	ENSGGOP00000049889	ENSGGOP00000012972	ENSGGOP00000049889	Anti-silencing function 1B histone chaperone.	annotation not available	0.795
ASF1B	HAT1	ENSGGOP00000012972	ENSGGOP00000009140	Anti-silencing function 1B histone chaperone.	Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.	0.950
ASF1B	IPO4	ENSGGOP00000012972	ENSGGOP00000023342	Anti-silencing function 1B histone chaperone.	Importin 4.	0.890
C16H16orf72	IPO4	ENSGGOP00000010474	ENSGGOP00000023342	Chromosome 16 open reading frame 72.	Importin 4.	0.715
C16H16orf72	KPNB1	ENSGGOP00000010474	ENSGGOP00000007915	Chromosome 16 open reading frame 72.	Karyopherin subunit beta 1.	0.575
ENSGGOP00000032687	ASF1A	ENSGGOP00000032687	ENSGGOP00000009810	Histone domain-containing protein.	Anti-silencing function 1A histone chaperone.	0.870
ENSGGOP00000032687	ASF1B	ENSGGOP00000032687	ENSGGOP00000012972	Histone domain-containing protein.	Anti-silencing function 1B histone chaperone.	0.880
ENSGGOP00000032687	ENSGGOP00000049889	ENSGGOP00000032687	ENSGGOP00000049889	Histone domain-containing protein.	annotation not available	0.767
ENSGGOP00000032687	HAT1	ENSGGOP00000032687	ENSGGOP00000009140	Histone domain-containing protein.	Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.	0.426
ENSGGOP00000032687	IPO4	ENSGGOP00000032687	ENSGGOP00000023342	Histone domain-containing protein.	Importin 4.	0.721
ENSGGOP00000049889	ASF1A	ENSGGOP00000049889	ENSGGOP00000009810	annotation not available	Anti-silencing function 1A histone chaperone.	0.838
ENSGGOP00000049889	ASF1B	ENSGGOP00000049889	ENSGGOP00000012972	annotation not available	Anti-silencing function 1B histone chaperone.	0.795
ENSGGOP00000049889	ENSGGOP00000032687	ENSGGOP00000049889	ENSGGOP00000032687	annotation not available	Histone domain-containing protein.	0.767