Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C22H22orf31 | CT83 | ENSGGOP00000028493 | ENSGGOP00000017239 | Chromosome 22 open reading frame 31. | Cancer/testis antigen 83. | 0.506 |
C22H22orf31 | PEAK3 | ENSGGOP00000028493 | ENSGGOP00000024750 | Chromosome 22 open reading frame 31. | PEAK family member 3. | 0.480 |
CT83 | C22H22orf31 | ENSGGOP00000017239 | ENSGGOP00000028493 | Cancer/testis antigen 83. | Chromosome 22 open reading frame 31. | 0.506 |
CT83 | PEAK3 | ENSGGOP00000017239 | ENSGGOP00000024750 | Cancer/testis antigen 83. | PEAK family member 3. | 0.446 |
ENSGGOP00000043200 | FAM20A | ENSGGOP00000043200 | ENSGGOP00000003050 | Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. | FAM20A golgi associated secretory pathway pseudokinase. | 0.439 |
ENSGGOP00000043200 | PEAK3 | ENSGGOP00000043200 | ENSGGOP00000024750 | Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. | PEAK family member 3. | 0.483 |
FAM20A | ENSGGOP00000043200 | ENSGGOP00000003050 | ENSGGOP00000043200 | FAM20A golgi associated secretory pathway pseudokinase. | Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. | 0.439 |
FAM20A | PAN3 | ENSGGOP00000003050 | ENSGGOP00000015690 | FAM20A golgi associated secretory pathway pseudokinase. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.449 |
FAM20A | PEAK3 | ENSGGOP00000003050 | ENSGGOP00000024750 | FAM20A golgi associated secretory pathway pseudokinase. | PEAK family member 3. | 0.561 |
FAM20A | PSKH2 | ENSGGOP00000003050 | ENSGGOP00000000086 | FAM20A golgi associated secretory pathway pseudokinase. | Protein serine kinase H2. | 0.436 |
FAM20A | SELENOO | ENSGGOP00000003050 | ENSGGOP00000024939 | FAM20A golgi associated secretory pathway pseudokinase. | Selenoprotein O. | 0.483 |
FAM20A | STKLD1 | ENSGGOP00000003050 | ENSGGOP00000014143 | FAM20A golgi associated secretory pathway pseudokinase. | Serine/threonine kinase like domain containing 1. | 0.473 |
ITSN2 | PEAK3 | ENSGGOP00000007432 | ENSGGOP00000024750 | Intersectin 2. | PEAK family member 3. | 0.621 |
ITSN2 | RND2 | ENSGGOP00000007432 | ENSGGOP00000030346 | Intersectin 2. | Uncharacterized protein. | 0.968 |
PAN3 | FAM20A | ENSGGOP00000015690 | ENSGGOP00000003050 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | FAM20A golgi associated secretory pathway pseudokinase. | 0.449 |
PAN3 | PEAK3 | ENSGGOP00000015690 | ENSGGOP00000024750 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | PEAK family member 3. | 0.483 |
PAN3 | PSKH2 | ENSGGOP00000015690 | ENSGGOP00000000086 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | Protein serine kinase H2. | 0.507 |
PAN3 | STKLD1 | ENSGGOP00000015690 | ENSGGOP00000014143 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | Serine/threonine kinase like domain containing 1. | 0.507 |
PEAK3 | C22H22orf31 | ENSGGOP00000024750 | ENSGGOP00000028493 | PEAK family member 3. | Chromosome 22 open reading frame 31. | 0.480 |
PEAK3 | CT83 | ENSGGOP00000024750 | ENSGGOP00000017239 | PEAK family member 3. | Cancer/testis antigen 83. | 0.446 |
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