UCHL3 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLPB	ENSGGOP00000050590	ENSGGOP00000005929	ENSGGOP00000050590	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Uncharacterized protein.	0.402
CLPB	UBC	ENSGGOP00000005929	ENSGGOP00000001286	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Polyubiquitin-C; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...]	0.402
CLPB	UCHL3	ENSGGOP00000005929	ENSGGOP00000026441	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Ubiquitin carboxyl-terminal hydrolase.	0.842
COPS5	ENSGGOP00000019740	ENSGGOP00000026909	ENSGGOP00000019740	COP9 signalosome subunit 5.	annotation not available	0.591
COPS5	ENSGGOP00000038520	ENSGGOP00000026909	ENSGGOP00000038520	COP9 signalosome subunit 5.	Ubiquitin-like domain-containing protein.	0.591
COPS5	ENSGGOP00000050590	ENSGGOP00000026909	ENSGGOP00000050590	COP9 signalosome subunit 5.	Uncharacterized protein.	0.621
COPS5	G3SEP4_GORGO	ENSGGOP00000026909	ENSGGOP00000026578	COP9 signalosome subunit 5.	Ubiquitin-like domain-containing protein.	0.591
COPS5	NEDD8	ENSGGOP00000026909	ENSGGOP00000015709	COP9 signalosome subunit 5.	NEDD8 ubiquitin like modifier.	0.974
COPS5	RPS27A	ENSGGOP00000026909	ENSGGOP00000007509	COP9 signalosome subunit 5.	Ubiquitin-like domain-containing protein.	0.591
COPS5	UBA52	ENSGGOP00000026909	ENSGGOP00000004534	COP9 signalosome subunit 5.	Ubiquitin-like domain-containing protein.	0.723
COPS5	UBC	ENSGGOP00000026909	ENSGGOP00000001286	COP9 signalosome subunit 5.	Polyubiquitin-C; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...]	0.628
COPS5	UCHL3	ENSGGOP00000026909	ENSGGOP00000026441	COP9 signalosome subunit 5.	Ubiquitin carboxyl-terminal hydrolase.	0.772
ENSGGOP00000019740	COPS5	ENSGGOP00000019740	ENSGGOP00000026909	annotation not available	COP9 signalosome subunit 5.	0.591
ENSGGOP00000019740	ENSGGOP00000050590	ENSGGOP00000019740	ENSGGOP00000050590	annotation not available	Uncharacterized protein.	0.977
ENSGGOP00000019740	G3SEP4_GORGO	ENSGGOP00000019740	ENSGGOP00000026578	annotation not available	Ubiquitin-like domain-containing protein.	0.900
ENSGGOP00000019740	NEDD8	ENSGGOP00000019740	ENSGGOP00000015709	annotation not available	NEDD8 ubiquitin like modifier.	0.812
ENSGGOP00000019740	RPS27A	ENSGGOP00000019740	ENSGGOP00000007509	annotation not available	Ubiquitin-like domain-containing protein.	0.900
ENSGGOP00000019740	UBA52	ENSGGOP00000019740	ENSGGOP00000004534	annotation not available	Ubiquitin-like domain-containing protein.	0.996
ENSGGOP00000019740	UBC	ENSGGOP00000019740	ENSGGOP00000001286	annotation not available	Polyubiquitin-C; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair [...]	0.987
ENSGGOP00000019740	UCHL3	ENSGGOP00000019740	ENSGGOP00000026441	annotation not available	Ubiquitin carboxyl-terminal hydrolase.	0.750