STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATL3Atlastin GTPase 3. (542 aa)    
Predicted Functional Partners:
SPAST
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.784
RTN3
Reticulon.
    
 
 0.710
ENSGGOP00000033434
Receptor expression-enhancing protein.
    
 
 0.704
RTN1
Reticulon.
    
 
 0.698
REEP5
Receptor expression-enhancing protein.
    
 
 0.673
GABARAPL2
GABA type A receptor associated protein like 2.
      
 0.672
GABARAPL1
Uncharacterized protein.
      
 0.672
SSNA1
SS nuclear autoantigen 1.
      
 0.634
G3QIV1_GORGO
Cell cycle progression 1.
      
 0.623
RETREG1
Reticulophagy regulator 1.
      
 0.621
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.