TCEA1 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3RXY3_GORGO	G3SH53_GORGO	ENSGGOP00000020670	ENSGGOP00000027441	TAFII28 domain-containing protein.	TAFII28 domain-containing protein.	0.900
G3RXY3_GORGO	POLR2A	ENSGGOP00000020670	ENSGGOP00000014450	TAFII28 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.798
G3RXY3_GORGO	POLR2I	ENSGGOP00000020670	ENSGGOP00000015046	TAFII28 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.729
G3RXY3_GORGO	TAF13	ENSGGOP00000020670	ENSGGOP00000009307	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 13.	0.992
G3RXY3_GORGO	TAF2	ENSGGOP00000020670	ENSGGOP00000007336	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 2.	0.993
G3RXY3_GORGO	TAF3	ENSGGOP00000020670	ENSGGOP00000016296	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 3.	0.991
G3RXY3_GORGO	TAF7L	ENSGGOP00000020670	ENSGGOP00000004380	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 7 like.	0.990
G3RXY3_GORGO	TCEA1	ENSGGOP00000020670	ENSGGOP00000024141	TAFII28 domain-containing protein.	Transcription elongation factor A1.	0.930
G3SH53_GORGO	G3RXY3_GORGO	ENSGGOP00000027441	ENSGGOP00000020670	TAFII28 domain-containing protein.	TAFII28 domain-containing protein.	0.900
G3SH53_GORGO	POLR2A	ENSGGOP00000027441	ENSGGOP00000014450	TAFII28 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.798
G3SH53_GORGO	POLR2I	ENSGGOP00000027441	ENSGGOP00000015046	TAFII28 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.729
G3SH53_GORGO	TAF13	ENSGGOP00000027441	ENSGGOP00000009307	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 13.	0.992
G3SH53_GORGO	TAF2	ENSGGOP00000027441	ENSGGOP00000007336	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 2.	0.993
G3SH53_GORGO	TAF3	ENSGGOP00000027441	ENSGGOP00000016296	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 3.	0.991
G3SH53_GORGO	TAF7L	ENSGGOP00000027441	ENSGGOP00000004380	TAFII28 domain-containing protein.	TATA-box binding protein associated factor 7 like.	0.990
G3SH53_GORGO	TCEA1	ENSGGOP00000027441	ENSGGOP00000024141	TAFII28 domain-containing protein.	Transcription elongation factor A1.	0.930
IWS1	POLR2A	ENSGGOP00000010154	ENSGGOP00000014450	Interacts with SUPT6H, CTD assembly factor 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.854
IWS1	POLR2I	ENSGGOP00000010154	ENSGGOP00000015046	Interacts with SUPT6H, CTD assembly factor 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.712
IWS1	SUPT6H	ENSGGOP00000010154	ENSGGOP00000016302	Interacts with SUPT6H, CTD assembly factor 1.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.991
IWS1	TCEA1	ENSGGOP00000010154	ENSGGOP00000024141	Interacts with SUPT6H, CTD assembly factor 1.	Transcription elongation factor A1.	0.950