PABPC5 protein (Gorilla gorilla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gorilla gorilla

NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGGOP00000034916	ENSGGOP00000035740	ENSGGOP00000034916	ENSGGOP00000035740	PABC domain-containing protein.	TDP43_N domain-containing protein.	0.645
ENSGGOP00000034916	ENSGGOP00000036779	ENSGGOP00000034916	ENSGGOP00000036779	PABC domain-containing protein.	BCL2L2-PABPN1 readthrough.	0.542
ENSGGOP00000034916	ENSGGOP00000037730	ENSGGOP00000034916	ENSGGOP00000037730	PABC domain-containing protein.	TDP43_N domain-containing protein.	0.645
ENSGGOP00000034916	ENSGGOP00000037882	ENSGGOP00000034916	ENSGGOP00000037882	PABC domain-containing protein.	Uncharacterized protein.	0.967
ENSGGOP00000034916	ENSGGOP00000041805	ENSGGOP00000034916	ENSGGOP00000041805	PABC domain-containing protein.	RRM domain-containing protein.	0.683
ENSGGOP00000034916	ENSGGOP00000045643	ENSGGOP00000034916	ENSGGOP00000045643	PABC domain-containing protein.	Uncharacterized protein.	0.631
ENSGGOP00000034916	PABPC1	ENSGGOP00000034916	ENSGGOP00000006641	PABC domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.631
ENSGGOP00000034916	PABPC5	ENSGGOP00000034916	ENSGGOP00000027578	PABC domain-containing protein.	Polyadenylate-binding protein 5; Binds the poly(A) tail of mRNA. May be involved in cytoplasmic regulatory processes of mRNA metabolism. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo (By similarity).	0.805
ENSGGOP00000034916	TARDBP	ENSGGOP00000034916	ENSGGOP00000014979	PABC domain-containing protein.	RRM domain-containing protein.	0.645
ENSGGOP00000035740	ENSGGOP00000034916	ENSGGOP00000035740	ENSGGOP00000034916	TDP43_N domain-containing protein.	PABC domain-containing protein.	0.645
ENSGGOP00000035740	ENSGGOP00000037882	ENSGGOP00000035740	ENSGGOP00000037882	TDP43_N domain-containing protein.	Uncharacterized protein.	0.693
ENSGGOP00000035740	ENSGGOP00000045643	ENSGGOP00000035740	ENSGGOP00000045643	TDP43_N domain-containing protein.	Uncharacterized protein.	0.564
ENSGGOP00000035740	G3QN25_GORGO	ENSGGOP00000035740	ENSGGOP00000003929	TDP43_N domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.645
ENSGGOP00000035740	PABPC1	ENSGGOP00000035740	ENSGGOP00000006641	TDP43_N domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.564
ENSGGOP00000035740	PABPC5	ENSGGOP00000035740	ENSGGOP00000027578	TDP43_N domain-containing protein.	Polyadenylate-binding protein 5; Binds the poly(A) tail of mRNA. May be involved in cytoplasmic regulatory processes of mRNA metabolism. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo (By similarity).	0.661
ENSGGOP00000035740	TARDBP	ENSGGOP00000035740	ENSGGOP00000014979	TDP43_N domain-containing protein.	RRM domain-containing protein.	0.633
ENSGGOP00000036779	ENSGGOP00000034916	ENSGGOP00000036779	ENSGGOP00000034916	BCL2L2-PABPN1 readthrough.	PABC domain-containing protein.	0.542
ENSGGOP00000036779	ENSGGOP00000037882	ENSGGOP00000036779	ENSGGOP00000037882	BCL2L2-PABPN1 readthrough.	Uncharacterized protein.	0.581
ENSGGOP00000036779	ENSGGOP00000045643	ENSGGOP00000036779	ENSGGOP00000045643	BCL2L2-PABPN1 readthrough.	Uncharacterized protein.	0.581
ENSGGOP00000036779	G3QN25_GORGO	ENSGGOP00000036779	ENSGGOP00000003929	BCL2L2-PABPN1 readthrough.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.542