STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGGOP00000030133Calpain 8; Belongs to the peptidase C2 family. (632 aa)    
Predicted Functional Partners:
CCNB3
Cyclin B3; Belongs to the cyclin family.
      
 0.877
ECSCR
Uncharacterized protein.
      
 0.877
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
      
 0.874
DLGAP4
DLG associated protein 4.
      
 0.871
G3SKV1_GORGO
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.871
CAST
Calpastatin.
   
 0.869
ENSGGOP00000030680
Rab interacting lysosomal protein like 1.
      
 0.853
SHANK2
Uncharacterized protein.
      
 0.804
CAPNS1
Calpain small subunit 1.
   
0.790
CAPN1
Calpain 1; Belongs to the peptidase C2 family.
  
0.775
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.