STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA1Homeobox A1. (336 aa)    
Predicted Functional Partners:
HOXB1
Homeobox protein Hox-B1; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Acts on the anterior body structures (By similarity); Belongs to the Antp homeobox family. Labial subfamily.
   
0.935
HOXD1
Homeobox domain-containing protein.
   
 
 
0.904
CHN1
Uncharacterized protein.
      
 0.673
PBX1
PBX homeobox 1.
    
 0.650
SALL4
Spalt like transcription factor 4.
    
 
 0.556
ROBO3
Roundabout guidance receptor 3.
      
 0.551
CRABP1
Cellular retinoic acid binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.526
SPRY1
Sprouty RTK signaling antagonist 1.
    
 
 0.468
PBX3
PBX homeobox 3.
    
 0.448
PBX4
PBX homeobox 4.
    
 0.448
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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