Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBQLN2Ubiquilin 2. (624 aa)    
Predicted Functional Partners:
UBQLN1
Ubiquilin 1.
   
   0.984
UBQLN4
Ubiquilin 4.
   
   0.962
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.959
ADRM1
Adhesion regulating molecule 1.
   
 0.958
DESI1
Desumoylating isopeptidase 1.
    
 
 0.928
KXD1
Ubiquitin-like domain-containing protein.
   
 0.870
UBQLN3
Ubiquilin 3.
   
   0.857
ENSPPAP00000016470
VWFA domain-containing protein.
   
 0.856
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.836
RPS28
Ribosomal protein S28.
   
 0.818
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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