STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUB1OTU domain-containing protein. (299 aa)    
Predicted Functional Partners:
UBE2N
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.956
LOC100987671
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.956
ENSPPAP00000040700
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.956
RNF128
Ring finger protein 128.
    
 0.947
ENSPPAP00000008828
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.944
UBE2V2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.913
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.875
KXD1
Ubiquitin-like domain-containing protein.
    
 
 0.866
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.850
ENSPPAP00000019066
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.841
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.