STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38ATransmembrane protein 38A. (299 aa)    
Predicted Functional Partners:
RPL3L
Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.
   
  
 0.733
ANKRD23
Ankyrin repeat domain 23.
   
 
 0.712
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
  
 0.697
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
  
 0.697
MIOX
Myo-inositol oxygenase.
      
 0.689
CAPN3
Calpain 3; Belongs to the peptidase C2 family.
      
 0.687
UMOD
Uromodulin.
      
 0.678
SLC12A3
Solute carrier family 12 member 3.
      
 0.677
AQP6
Aquaporin 6; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.677
TMEM154
Transmembrane protein 154.
      
 0.673
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.