Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBXN10UBX domain protein 10. (280 aa)    
Predicted Functional Partners:
UBXN6
UBX domain protein 6.
    
 
 0.959
UBXN2A
UBX domain protein 2A.
    
 
 0.957
IFT74
Intraflagellar transport 74.
    
 0.947
TTC26
Tetratricopeptide repeat domain 26.
    
 0.945
IFT88
Intraflagellar transport 88.
    
 0.945
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.935
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 
 0.931
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.921
NSFL1C
NSFL1 cofactor.
    
 
 0.821
LOC100982674
UBX domain-containing protein.
    
 
 0.821
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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