Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEAF1Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
ZMYND11
Zinc finger MYND-type containing 11.
   
  
 0.646
ZMYND19
Zinc finger MYND-type containing 19.
      
 0.563
GAL3ST3
Uncharacterized protein.
      
 0.560
HELZ
Helicase with zinc finger.
      
 0.537
TMEM80
Transmembrane protein 80.
      
 0.533
BUD31
BUD31 homolog.
      
 0.531
TAPT1
Transmembrane anterior posterior transformation 1.
      
 0.525
D2HGDH
D-2-hydroxyglutarate dehydrogenase.
   
 
 0.520
AP1S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
      
 0.506
GCSH
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
    
 
 0.492
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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