STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100981509DEAD-box helicase 19A. (485 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
    
 
 0.914
DDX19B
DEAD-box helicase 19B.
  
  
 
0.900
MIF4GD
MIF4G domain containing.
    
   0.814
GLE1
GLE1 RNA export mediator.
    
 
 0.772
NUP88
Nucleoporin 88.
   
 
 0.733
CTIF
Cap binding complex dependent translation initiation factor.
    
   0.717
DDX25
DEAD-box helicase 25.
  
 
  
0.675
RNF19A
RBR-type E3 ubiquitin transferase.
      
 0.558
BMP8A
TGF_BETA_2 domain-containing protein.
      
 0.493
XPO1
Exportin 1.
    
 
 0.469
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.