Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LASP1LIM and SH3 protein 1. (261 aa)    
Predicted Functional Partners:
ZYX
Zyxin.
    
 
 0.817
RPL28
Ribosomal protein L28.
      
 0.703
CRYBA2
Crystallin beta A2; Belongs to the beta/gamma-crystallin family.
    
   0.641
OR5AC2
Olfactory receptor.
    
 
 0.590
XIRP2
Xin actin binding repeat containing 2.
   
 0.560
LPP
LIM domain containing preferred translocation partner in lipoma.
    
 
 0.536
MLLT6
MLLT6, PHD finger containing.
      
 0.534
EZR
Ezrin.
   
 
 0.504
TRAF4
TNF receptor-associated factor.
    
 
 0.494
PPP1R1B
Protein phosphatase 1 regulatory inhibitor subunit 1B.
      
 0.487
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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