STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPPAP00000001617RRM domain-containing protein. (161 aa)    
Predicted Functional Partners:
SRSF1
Uncharacterized protein.
   
 0.878
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.809
TRA2B
Transformer 2 beta homolog.
   
 0.799
TRA2A
Transformer 2 alpha homolog.
   
 0.738
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.680
LOC103783761
RRM domain-containing protein.
   
 0.680
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.661
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.652
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 0.637
FUS
FUS RNA binding protein.
   
 0.611
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.